5H46 image
Deposition Date 2016-10-31
Release Date 2017-09-06
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5H46
Keywords:
Title:
Mycobacterium smegmatis Dps1 mutant - F47E
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
F 4 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA protection during starvation protein
Gene (Uniprot):dps
Mutagens:F47E
Chain IDs:A
Chain Length:149
Number of Molecules:1
Biological Source:Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Ligand Molecules
Primary Citation
A Mutation Directs the Structural Switch of DNA Binding Proteins under Starvation to a Ferritin-like Protein Cage.
Structure 25 1449 1454.e3 (2017)
PMID: 28823472 DOI: 10.1016/j.str.2017.07.006

Abstact

Proteins of the ferritin family are ubiquitous in living organisms. With their spherical cage-like structures they are the iron storehouses in cells. Subfamilies of ferritins include 24-meric ferritins and bacterioferritins (maxiferritins), and 12-meric Dps (miniferritins). Dps safeguards DNA by direct binding, affording physical protection and safeguards from free radical-mediated damage by sequestering iron in its core. The maxiferritins can oxidize and store iron but cannot bind DNA. Here we show that a mutation at a critical interface in Dps alters its assembly from the canonical 12-mer to a ferritin-like 24-mer under crystallization. This structural switch was attributed to the conformational alteration of a highly conserved helical loop and rearrangement of the C-terminus. Our results demonstrate a novel concept of mutational switch between related protein subfamilies and corroborate the popular model for evolution by which subtle substitutions in an amino acid sequence lead to diversification among proteins.

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Chemical

Disease

Primary Citation of related structures
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