5H11 image
Deposition Date 2016-10-07
Release Date 2017-02-01
Last Version Date 2024-03-20
Entry Detail
PDB ID:
5H11
Keywords:
Title:
Crystal structure of Zebrafish Sec10
Biological Source:
Source Organism:
Danio rerio (Taxon ID: 7955)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.73 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):exoc5
Mutations:385-394 deletion
Chain IDs:A
Chain Length:509
Number of Molecules:1
Biological Source:Danio rerio
Ligand Molecules
Primary Citation
Crystal structure of Sec10, a subunit of the exocyst complex
Sci Rep 7 40909 40909 (2017)
PMID: 28098232 DOI: 10.1038/srep40909

Abstact

The exocyst complex is a heterooctameric protein complex composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84. This complex plays an essential role in trafficking secretory vesicles to the plasma membrane through its interaction with phosphatidylinositol 4,5-bisphosphate and small GTPases. To date, the near-full-length structural information of each subunit has been limited to Exo70, although the C-terminal half structures of Sec6, Sec15 and Exo84 and the structures of the small GTPase-binding domains of Sec3, Sec5 and Exo84 have been reported. Here, we report the crystal structure of the near-full-length zebrafish Sec10 (zSec10) at 2.73 Å resolution. The structure of zSec10 consists of tandem antiparallel helix bundles that form a straight rod, like helical core regions of other exocyst subunits. This structure provides the first atomic details of Sec10, which may be useful for future functional and structural studies of this subunit and the exocyst complex.

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Primary Citation of related structures