ISDA

Deposition Date 2016-08-20

Release Date 2017-08-23

Last Version Date 2023-11-08

Entry Detail

PDB ID:

5GTG

Keywords:

ISOMERASE

Title:

Crystal structure of onion lachrymatory factor synthase (LFS) containing 1,2-propanediol

Biological Source:

Source Organism:

Allium cepa (Taxon ID: 4679)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.25

R-Value Work:

0.22

R-Value Observed:

0.23

Space Group:

P 41

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lachrymatory-factor synthase
Gene (Uniprot):LFS
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:175
Number of Molecules:8
Biological Source:Allium cepa

UniProt ID:P59082 Pfam ID:PF10604

Ligand Molecules

MES

PGO

SO4

Peptide-like Molecules

PRD_900006

Primary Citation

Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase

Arakawa, T, Sato, Y, Yamada, M, Takabe, J, Moriwaki, Y, Masamura, N, Kato, M, Aoyagi, M, Kamoi, T, Terada, T, Shimizu, K, Tsuge, N, Imai, S, Fushinobu, S.Show

Acs Catalysis 10 9 19 (2020)

DOI: 10.1021/acscatal.9b03720

Primary Citation of related structures