5GQR image
Deposition Date 2016-08-08
Release Date 2016-12-14
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5GQR
Keywords:
Title:
Crystal structure of PXY-CLE41-SERK2
Biological Source:
Source Organism:
Arabidopsis thaliana (Taxon ID: 3702)
Arabideae (Taxon ID: 981070)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 62 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Leucine-rich repeat receptor-like protein kinase TDR
Gene (Uniprot):TDR
Chain IDs:A (auth: B)
Chain Length:598
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Molecule:TDIF
Chain IDs:B (auth: C)
Chain Length:12
Number of Molecules:1
Biological Source:Arabideae
Polymer Type:polypeptide(L)
Molecule:Somatic embryogenesis receptor kinase 2
Gene (Uniprot):SERK2
Chain IDs:C (auth: K)
Chain Length:185
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
SERK Family Receptor-like Kinases Function as Co-receptors with PXY for Plant Vascular Development
Mol Plant 9 1406 1414 (2016)
PMID: 27449136 DOI: 10.1016/j.molp.2016.07.004

Abstact

In Arabidopsis, the CLAVATA3/EMBRYO SURROUNDING REGION-RELATED (CLE) peptides play important roles in regulating proliferation and differentiation of plant-specific stem cells. Although receptors of CLEs are reported to be leucine-rich repeat receptor kinases, the mechanisms underlying CLE-induced receptor activation remain largely unknown. Here we show that SOMATIC EMBRYOGENESIS RECEPTOR KINASEs (SERKs) serve as co-receptors in CLE41/TDIF-PXY signaling to regulate plant vascular development. TDIF induces interaction of its receptor PXY with SERKs in vitro and in vivo. Furthermore, the serk1-1 serk2-1 bak1-5 mutant plants are less sensitive to TDIF, phenocopying the pxy mutant with a compromised promotion of procambial cell proliferation. Crystal structure of the PXY-TDIF-SERK2 complex reveals that the last amino acid of TDIF conserved among CLEs and other evolutionary-related peptides is important for the interaction between SERK2 and PXY. Taken together, our current study identifies SERKs as signaling components of the TDIF-PXY pathway and suggests a conserved activation mechanism of CLE receptors.

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Primary Citation of related structures