ISDA

Deposition Date 2016-07-30

Release Date 2017-10-04

Last Version Date 2023-11-08

Entry Detail

PDB ID:

5GP0

Keywords:

HYDROLASE

Title:

Crystal structure of geraniol-NUDX1 complex

Biological Source:

Source Organism:

Arabidopsis thaliana (Taxon ID: 3702)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.20

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 2 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nudix hydrolase 1
Gene (Uniprot):NUDT1
Chain IDs:A (auth: E), B (auth: F), C (auth: I), D (auth: A)
Chain Length:149
Number of Molecules:4
Biological Source:Arabidopsis thaliana

UniProt ID:Q9CA40 Pfam ID:PF00293 EC:3.6.1.55

Ligand Molecules

GOL

GPP

Primary Citation

Structural Insights into the Substrate Recognition Mechanism of Arabidopsis GPP-Bound NUDX1 for Noncanonical Monoterpene Biosynthesis.

Liu, J, Guan, Z, Liu, H, Qi, L, Zhang, D, Zou, T, Yin, P.Show

Mol Plant 11 218 221 (2018)

PMID: 29066356 DOI: 10.1016/j.molp.2017.10.006

Primary Citation of related structures