5GJY image
Deposition Date 2016-07-02
Release Date 2017-05-10
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5GJY
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of DUCK MHC CLASS I for 1.71 angstrom
Biological Source:
Source Organism:
Anas platyrhynchos (Taxon ID: 8839)
unidentified influenza virus (Taxon ID: 11309)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.71 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
5GJY validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):Du5MHC I
Chain IDs:A
Chain Length:273
Number of Molecules:1
Biological Source:Anas platyrhynchos
UniProt ID:Q6I7L2 Pfam ID:PF00129, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):b2m
Chain IDs:B
Chain Length:104
Number of Molecules:1
Biological Source:Anas platyrhynchos
UniProt ID:Q14U75 Pfam ID:PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MET-VAL-MET-GLU-LEU-ILE-ARG-MET-ILE
Chain IDs:C
Chain Length:9
Number of Molecules:1
Biological Source:unidentified influenza virus
UniProt ID:Q9Q0U8
Primary Citation
Structural Definition Of Duck MHC Class I Explains the Resistance to Influenza A virus
To Be Published ? ? ? (?)
Primary Citation of related structures
5GJX
5GJZ