ISDA: 5G4R

Deposition Date 2016-05-16

Release Date 2016-07-06

Last Version Date 2024-05-08

Entry Detail

PDB ID:

5G4R

Keywords:

TRANSCRIPTION

Title:

BROMODOMAIN OF HUMAN BRPF1 WITH N-1,3-dimethyl-6-2R-2- methylpiperazin-1-yl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl-2- methoxybenzamide

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

ESCHERICHIA COLI

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.96 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:PEREGRIN
Gene (Uniprot):BRPF1
Chain IDs:A, B, C, D
Chain Length:118
Number of Molecules:4
Biological Source:HOMO SAPIENS

UniProt ID:P55201 Pfam ID:PF00439

Ligand Molecules

LF1

Primary Citation

Gsk6853, a Chemical Probe for Inhibition of the Brpf1 Bromodomain.

Bamborough, P, Barnett, H.A, Becher, I, Bird, M.J, Chung, C, Craggs, P.D, Demont, E.H, Diallo, H, Fallon, D.J, Gordon, L.J, Grandi, P, Hobbs, C.I, Hooper-Greenhill, E, Jones, E.J, Law, R.P, Le Gall, A, Lugo, D, Michon, A, Mitchell, D.J, Prinjha, R.K, Sheppard, R.J, Watson, A.J.B, Watson, R.J.Show

Acs Med.Chem.Lett. 7 552 ? (2016)

PMID: 27326325 DOI: 10.1021/ACSMEDCHEMLETT.6B00092

Abstact

The BRPF (Bromodomain and PHD Finger-containing) protein family are important scaffolding proteins for assembly of MYST histone acetyltransferase complexes. A selective benzimidazolone BRPF1 inhibitor showing micromolar activity in a cellular target engagement assay was recently described. Herein, we report the optimization of this series leading to the identification of a superior BRPF1 inhibitor suitable for in vivo studies.

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Primary Citation of related structures

Abstact

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