5G1U image
Entry Detail
PDB ID:
5G1U
Keywords:
Title:
Linalool Dehydratase Isomerase in complex with Geraniol
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-03-30
Release Date:
2017-01-11
Method Details:
Experimental Method:
Resolution:
2.57 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:LINALOOL DEHYDRATASE/ISOMERASE
Chain IDs:A, B, C, D, E
Chain Length:372
Number of Molecules:5
Biological Source:CASTELLANIELLA DEFRAGRANS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Structural and functional insights into asymmetric enzymatic dehydration of alkenols.
Nat. Chem. Biol. 13 275 281 (2017)
PMID: 28068311 DOI: 10.1038/nchembio.2271

Abstact

The asymmetric dehydration of alcohols is an important process for the direct synthesis of alkenes. We report the structure and substrate specificity of the bifunctional linalool dehydratase isomerase (LinD) from the bacterium Castellaniella defragrans that catalyzes in nature the hydration of β-myrcene to linalool and the subsequent isomerization to geraniol. Enzymatic kinetic resolutions of truncated and elongated aromatic and aliphatic tertiary alcohols (C5-C15) that contain a specific signature motif demonstrate the broad substrate specificity of LinD. The three-dimensional structure of LinD from Castellaniella defragrans revealed a pentamer with active sites at the protomer interfaces. Furthermore, the structure of LinD in complex with the product geraniol provides initial mechanistic insights into this bifunctional enzyme. Site-directed mutagenesis confirmed active site amino acid residues essential for its dehydration and isomerization activity. These structural and mechanistic insights facilitate the development of hydrating catalysts, enriching the toolbox for novel bond-forming biocatalysis.

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Primary Citation of related structures