ISDA

Deposition Date 2016-03-14

Release Date 2016-04-06

Last Version Date 2024-10-23

Entry Detail

PDB ID:

5FZL

Keywords:

OXIDOREDUCTASE

Title:

Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 3-methyl-N-pyridin-4-yl-1,2-oxazole-5-carboxamide (N09954a) (ligand modelled based on PANDDA event map, SGC - Diamond I04-1 fragment screening)

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

SPODOPTERA FRUGIPERDA

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.55 Å

R-Value Free:

0.23

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 65 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:LYSINE-SPECIFIC DEMETHYLASE 5B
Gene (Uniprot):KDM5B
Chain IDs:A
Chain Length:479
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:Q9UGL1 Pfam ID:PF02375, PF02373, PF21323, PF02928 EC:1.14.11.67

Ligand Molecules

DMS

EDO

PO4

UOI

Primary Citation

Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with 3D Fragment 3-Methyl-N-Pyridin-4-Yl-1,2-Oxazole-5-Carboxamide (N09954A) (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)

Nowak, R, Krojer, T, Johansson, C, Kupinska, K, Szykowska, A, Pearce, N, Talon, R, Collins, P, Gileadi, C, Strain-Damerell, C, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U.Show

To be Published ? ? ? (?)

Primary Citation of related structures