ISDA

Deposition Date 2016-03-09

Release Date 2017-03-22

Last Version Date 2024-01-10

Entry Detail

PDB ID:

5FYS

Keywords:

OXIDOREDUCTASE

Title:

Crystal structure of the catalytic domain of human JARID1B in complex with D-2-hydroxyglutarate

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

SPODOPTERA FRUGIPERDA

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.89 Å

R-Value Free:

0.22

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 65 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:LYSINE-SPECIFIC DEMETHYLASE 5B
Gene (Uniprot):KDM5B
Chain IDs:A
Chain Length:479
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:Q9UGL1 Pfam ID:PF02375, PF02373, PF21323, PF02928 EC:1.14.11.67

Ligand Molecules

2HG

EDO

EPE

Primary Citation

Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with D-2-Hydroxyglutarate

Nowak, R, Kopec, J, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.Show

To be Published ? ? ? (?)

Primary Citation of related structures