ISDA: 5FY9

Deposition Date 2016-03-04

Release Date 2017-03-22

Last Version Date 2024-01-10

Entry Detail

PDB ID:

5FY9

Keywords:

OXIDOREDUCTASE

Title:

Crystal structure of the catalytic domain of human JARID1B in complex with pyruvate

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

SPODOPTERA FRUGIPERDA

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.03 Å

R-Value Free:

0.23

R-Value Work:

0.19

R-Value Observed:

0.20

Space Group:

P 65 2 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B
Gene (Uniprot):KDM5B
Chain IDs:A
Chain Length:479
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:Q9UGL1 Pfam ID:PF02375, PF02373, PF21323, PF02928 EC:1.14.11.67

Ligand Molecules

EDO

EPE

PYR

Primary Citation

Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Pyruvate

Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.Show

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Primary Citation of related structures

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