5FX6 image
Entry Detail
PDB ID:
5FX6
Keywords:
Title:
Novel inhibitors of human rhinovirus 3C protease
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2016-02-24
Release Date:
2016-06-22
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:RHINOVIRUS 3C PROTEASE
Chain IDs:A
Chain Length:182
Number of Molecules:1
Biological Source:HUMAN RHINOVIRUS 2
Ligand Molecules
Primary Citation
Design and Structure-Activity Relationships of Novel Inhibitors of Human Rhinovirus 3C Protease.
Bioorg.Med.Chem.Lett. 26 3248 ? (2016)
PMID: 27265257 DOI: 10.1016/J.BMCL.2016.05.066

Abstact

Human rhinovirus (HRV) is a primary cause of common cold and is linked to exacerbation of underlying respiratory diseases such as asthma and COPD. HRV 3C protease, which is responsible for cleavage of viral polyprotein in to proteins essential for viral life-cycle, represents an important target. We have designed proline- and azetidine-based analogues of Rupintrivir that target the P2 pocket of the binding site. Potency optimization, aided with X-ray crystallography and quantum mechanical calculations, led to compounds with activity against a broad spectrum of HRV serotypes. Altogether, these compounds represent alternative starting points to identify promising leads in our continual efforts to treat HRV infections.

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Primary Citation of related structures