5FOZ image
Deposition Date 2015-11-26
Release Date 2016-10-05
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5FOZ
Keywords:
Title:
De novo structure of the binary mosquito larvicide BinAB at pH 10
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TOXIN
Gene (Uniprot):binA
Chain IDs:A
Chain Length:370
Number of Molecules:1
Biological Source:LYSINIBACILLUS SPHAERICUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LARVICIDAL TOXIN PROTEIN
Gene (Uniprot):binB
Chain IDs:B
Chain Length:448
Number of Molecules:1
Biological Source:LYSINIBACILLUS SPHAERICUS
Ligand Molecules
Primary Citation

Abstact

BinAB is a naturally occurring paracrystalline larvicide distributed worldwide to combat the devastating diseases borne by mosquitoes. These crystals are composed of homologous molecules, BinA and BinB, which play distinct roles in the multi-step intoxication process, transforming from harmless, robust crystals, to soluble protoxin heterodimers, to internalized mature toxin, and finally to toxic oligomeric pores. The small size of the crystals-50 unit cells per edge, on average-has impeded structural characterization by conventional means. Here we report the structure of Lysinibacillus sphaericus BinAB solved de novo by serial-femtosecond crystallography at an X-ray free-electron laser. The structure reveals tyrosine- and carboxylate-mediated contacts acting as pH switches to release soluble protoxin in the alkaline larval midgut. An enormous heterodimeric interface appears to be responsible for anchoring BinA to receptor-bound BinB for co-internalization. Remarkably, this interface is largely composed of propeptides, suggesting that proteolytic maturation would trigger dissociation of the heterodimer and progression to pore formation.

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Protein

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Disease

Primary Citation of related structures