5FOT image
Entry Detail
PDB ID:
5FOT
Keywords:
Title:
HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTU TETRAPEPTIDE
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2015-11-26
Release Date:
2016-03-30
Method Details:
Experimental Method:
Resolution:
1.19 Å
R-Value Free:
0.15
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA REPAIR AND RECOMBINATION PROTEIN RADA
Mutations:YES
Chain IDs:A
Chain Length:231
Number of Molecules:1
Biological Source:PYROCOCCUS FURIOSUS
Polymer Type:polypeptide(L)
Description:FHTU PEPTIDE
Chain IDs:B (auth: C)
Chain Length:6
Number of Molecules:1
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ABA B ALA ALPHA-AMINOBUTYRIC ACID
Ligand Molecules
Primary Citation
Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction.
FEBS Lett. 590 1094 ? (2016)
PMID: 26992456 DOI: 10.1002/1873-3468.12139

Abstact

RAD51 is a recombinase involved in the homologous recombination of double-strand breaks in DNA. RAD51 forms oligomers by binding to another molecule of RAD51 via an 'FxxA' motif, and the same recognition sequence is similarly utilised to bind BRCA2. We have tabulated the effects of mutation of this sequence, across a variety of experimental methods and from relevant mutations observed in the clinic. We use mutants of a tetrapeptide sequence to probe the binding interaction, using both isothermal titration calorimetry and X-ray crystallography. Where possible, comparison between our tetrapeptide mutational study and the previously reported mutations is made, discrepancies are discussed and the importance of secondary structure in interpreting alanine scanning and mutational data of this nature is considered.

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Primary Citation of related structures