5FOO image
Deposition Date 2015-11-24
Release Date 2016-02-17
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5FOO
Keywords:
Title:
6-phospho-beta-glucosidase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:6-PHOSPHO-BETA-D GLYCOSIDASE
Gene (Uniprot):SPy_1599
Mutagens:YES
Chain IDs:A, B, C, D, E, F
Chain Length:480
Number of Molecules:6
Biological Source:STREPTOCOCCUS PYOGENES
Primary Citation
Chemoenzymatic Synthesis of 6-Phospho-Cyclophellitol as a Novel Probe of 6-Phospho-Beta-Glucosidases.
FEBS Lett. 590 461 ? (2016)
PMID: 26790390 DOI: 10.1002/1873-3468.12059

Abstact

Covalent, mechanism-based inhibitors of glycosidases are valuable probe molecules for visualizing enzyme activities in complex systems. We, here, describe the chemoenzymatic synthesis of 6-phospho-cyclophellitol and evaluate its behaviour as a mechanism-based inactivator of the Streptococcus pyogenes 6-phospho-β-glucosidase from CAZy family GH1. We further present the three-dimensional structure of the inactivated enzyme, which reveals the constellation of active site residues responsible for the enzyme's specificity and confirms the covalent nature of the inactivation.

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Disease

Primary Citation of related structures
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