5FJS image
Deposition Date 2015-10-12
Release Date 2016-05-11
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5FJS
Keywords:
Title:
Bacterial beta-glucosidase reveals the structural and functional basis of genetic defects in human glucocerebrosidase 2 (GBA2)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GLUCOSYLCERAMIDASE
Gene (Uniprot):Thexy_2211
Chain IDs:A, B
Chain Length:787
Number of Molecules:2
Biological Source:THERMOANAEROBACTERIUM XYLANOLYTICUM
Ligand Molecules
Primary Citation
Bacterial Beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (Gba2)
Acs Chem.Biol. 11 1891 ? (2016)
PMID: 27115290 DOI: 10.1021/ACSCHEMBIO.6B00192

Abstact

Human glucosylcerebrosidase 2 (GBA2) of the CAZy family GH116 is responsible for the breakdown of glycosphingolipids on the cytoplasmic face of the endoplasmic reticulum and Golgi apparatus. Genetic defects in GBA2 result in spastic paraplegia and cerebellar ataxia, while cross-talk between GBA2 and GBA1 glucosylceramidases may affect Gaucher disease. Here, we report the first three-dimensional structure for any GH116 enzyme, Thermoanaerobacterium xylanolyticum TxGH116 β-glucosidase, alone and in complex with diverse ligands. These structures allow identification of the glucoside binding and active site residues, which are shown to be conserved with GBA2. Mutagenic analysis of TxGH116 and structural modeling of GBA2 provide a detailed structural and functional rationale for pathogenic missense mutations of GBA2.

Legend

Protein

Chemical

Disease

Primary Citation of related structures