5FFO image
Deposition Date 2015-12-18
Release Date 2017-01-25
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5FFO
Keywords:
Title:
Integrin alpha V beta 6 in complex with pro-TGF-beta
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.49 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin alpha-V
Gene (Uniprot):ITGAV
Chain IDs:A, E
Chain Length:601
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin beta-6
Gene (Uniprot):ITGB6
Chain IDs:B, F
Chain Length:257
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transforming growth factor beta-1
Gene (Uniprot):TGFB1
Chain IDs:C, D, G, H
Chain Length:363
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Force interacts with macromolecular structure in activation of TGF-beta.
Nature 542 55 59 (2017)
PMID: 28117447 DOI: 10.1038/nature21035

Abstact

Integrins are adhesion receptors that transmit force across the plasma membrane between extracellular ligands and the actin cytoskeleton. In activation of the transforming growth factor-β1 precursor (pro-TGF-β1), integrins bind to the prodomain, apply force, and release the TGF-β growth factor. However, we know little about how integrins bind macromolecular ligands in the extracellular matrix or transmit force to them. Here we show how integrin αVβ6 binds pro-TGF-β1 in an orientation biologically relevant for force-dependent release of TGF-β from latency. The conformation of the prodomain integrin-binding motif differs in the presence and absence of integrin binding; differences extend well outside the interface and illustrate how integrins can remodel extracellular matrix. Remodelled residues outside the interface stabilize the integrin-bound conformation, adopt a conformation similar to earlier-evolving family members, and show how macromolecular components outside the binding motif contribute to integrin recognition. Regions in and outside the highly interdigitated interface stabilize a specific integrin/pro-TGF-β orientation that defines the pathway through these macromolecules which actin-cytoskeleton-generated tensile force takes when applied through the integrin β-subunit. Simulations of force-dependent activation of TGF-β demonstrate evolutionary specializations for force application through the TGF-β prodomain and through the β- and not α-subunit of the integrin.

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