5FD7 image
Deposition Date 2015-12-15
Release Date 2015-12-30
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5FD7
Title:
X-ray Crystal Structure of ESCRT-III Snf7 core domain (conformation A)
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Vacuolar-sorting protein SNF7
Gene (Uniprot):SNF7
Chain IDs:A
Chain Length:140
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Primary Citation
Structural basis for activation, assembly and membrane binding of ESCRT-III Snf7 filaments.
Elife 4 ? ? (2015)
PMID: 26670543 DOI: 10.7554/eLife.12548

Abstact

The endosomal sorting complexes required for transport (ESCRTs) constitute hetero-oligomeric machines that catalyze multiple topologically similar membrane-remodeling processes. Although ESCRT-III subunits polymerize into spirals, how individual ESCRT-III subunits are activated and assembled together into a membrane-deforming filament remains unknown. Here, we determine X-ray crystal structures of the most abundant ESCRT-III subunit Snf7 in its active conformation. Using pulsed dipolar electron spin resonance spectroscopy (PDS), we show that Snf7 activation requires a prominent conformational rearrangement to expose protein-membrane and protein-protein interfaces. This promotes the assembly of Snf7 arrays with ~30 Å periodicity into a membrane-sculpting filament. Using a combination of biochemical and genetic approaches, both in vitro and in vivo, we demonstrate that mutations on these protein interfaces halt Snf7 assembly and block ESCRT function. The architecture of the activated and membrane-bound Snf7 polymer provides crucial insights into the spatially unique ESCRT-III-mediated membrane remodeling.

Legend

Protein

Chemical

Disease

Primary Citation of related structures