5FCG image
Deposition Date 2015-12-15
Release Date 2016-02-10
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5FCG
Keywords:
Title:
Crystal structure of Bcl-2 in complex with HBx-BH3 motif
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Hepatitis B virus (Taxon ID: 10407)
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.27
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Apoptosis regulator Bcl-2
Mutations:ALA36 mutation
Chain IDs:A
Chain Length:168
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein X
Chain IDs:B (auth: C)
Chain Length:26
Number of Molecules:1
Biological Source:Hepatitis B virus
Primary Citation
Structural and biochemical analysis of Bcl-2 interaction with the hepatitis B virus protein HBx
Proc.Natl.Acad.Sci.USA ? ? ? (2016)
PMID: 26858413 DOI: 10.1073/pnas.1525616113

Abstact

HBx is a hepatitis B virus protein that is required for viral infectivity and replication. Anti-apoptotic Bcl-2 family members are thought to be among the important host targets of HBx. However, the structure and function of HBx are poorly understood and the molecular mechanism of HBx-induced carcinogenesis remains unknown. In this study, we report biochemical and structural characterization of HBx. The recombinant HBx protein contains metal ions, in particular iron and zinc. A BH3-like motif in HBx (residues 110-135) binds Bcl-2 with a dissociation constant of ∼193 μM, which is drastically lower than that for a canonical BH3 motif from Bim or Bad. Structural analysis reveals that, similar to other BH3 motifs, the BH3-like motif of HBx adopts an amphipathic α-helix and binds the conserved BH3-binding groove on Bcl-2. Unlike the helical Bim or Bad BH3 motif, the C-terminal portion of the bound HBx BH3-like motif has an extended conformation and makes considerably fewer interactions with Bcl-2. These observations suggest that HBx may modulate Bcl-2 function in a way that is different from that of the classical BH3-only proteins.

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