5EVM image
Entry Detail
PDB ID:
5EVM
Keywords:
Title:
Crystal Structure of Nipah Virus Fusion Glycoprotein in the Prefusion State
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-11-20
Release Date:
2015-12-16
Method Details:
Experimental Method:
Resolution:
3.37 Å
R-Value Free:
0.21
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fusion glycoprotein F0
Mutations:N67D, N305D
Chain IDs:A, B, C, D, E, F
Chain Length:529
Number of Molecules:6
Biological Source:Nipah virus
Ligand Molecules
Primary Citation
Crystal Structure of the Pre-fusion Nipah Virus Fusion Glycoprotein Reveals a Novel Hexamer-of-Trimers Assembly.
Plos Pathog. 11 e1005322 e1005322 (2015)
PMID: 26646856 DOI: 10.1371/journal.ppat.1005322

Abstact

Nipah virus (NiV) is a paramyxovirus that infects host cells through the coordinated efforts of two envelope glycoproteins. The G glycoprotein attaches to cell receptors, triggering the fusion (F) glycoprotein to execute membrane fusion. Here we report the first crystal structure of the pre-fusion form of the NiV-F glycoprotein ectodomain. Interestingly this structure also revealed a hexamer-of-trimers encircling a central axis. Electron tomography of Nipah virus-like particles supported the hexameric pre-fusion model, and biochemical analyses supported the hexamer-of-trimers F assembly in solution. Importantly, structure-assisted site-directed mutagenesis of the interfaces between F trimers highlighted the functional relevance of the hexameric assembly. Shown here, in both cell-cell fusion and virus-cell fusion systems, our results suggested that this hexamer-of-trimers assembly was important during fusion pore formation. We propose that this assembly would stabilize the pre-fusion F conformation prior to cell attachment and facilitate the coordinated transition to a post-fusion conformation of all six F trimers upon triggering of a single trimer. Together, our data reveal a novel and functional pre-fusion architecture of a paramyxoviral fusion glycoprotein.

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