5ERU image
Deposition Date 2015-11-15
Release Date 2016-05-04
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5ERU
Keywords:
Title:
Ternary complex of GephE - ADP - Molybdenum cluster
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Gephyrin
Gene (Uniprot):Gphn
Chain IDs:A
Chain Length:419
Number of Molecules:1
Biological Source:Rattus norvegicus
Primary Citation
Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.
Structure 24 782 788 (2016)
PMID: 27112598 DOI: 10.1016/j.str.2016.02.023

Abstact

The molybdenum cofactor (Moco) is essential for the catalytic activity of all molybdenum-containing enzymes with the exception of nitrogenase. Moco biosynthesis follows an evolutionarily highly conserved pathway and genetic deficiencies in the corresponding human enzymes result in Moco deficiency, which manifests itself in severe neurological symptoms and death in childhood. In humans the final steps of Moco biosynthesis are catalyzed by gephyrin, specifically the penultimate adenylation of molybdopterin (MPT) by its N-terminal G domain (GephG) and the final metal incorporation by its C-terminal E domain (GephE). To better understand the poorly defined molecular framework of this final step, we determined high-resolution crystal structures of GephE in the apo state and in complex with ADP, AMP, and molybdate. Our data provide novel insights into the catalytic steps leading to final Moco maturation, namely deadenylation as well as molybdate binding and insertion.

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Primary Citation of related structures
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