5ELR image
Deposition Date 2015-11-05
Release Date 2016-01-13
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5ELR
Title:
Structure of the KH-QUA2 domain of T-STAR in complex with AAUAAU RNA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(*AP*AP*UP*AP*AP*U)-3')
Chain IDs:A (auth: B)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:KH domain-containing, RNA-binding, signal transduction-associated protein 3
Gene (Uniprot):KHDRBS3
Chain IDs:B (auth: C), C (auth: D)
Chain Length:136
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural basis of RNA recognition and dimerization by the STAR proteins T-STAR and Sam68.
Nat Commun 7 10355 10355 (2016)
PMID: 26758068 DOI: 10.1038/ncomms10355

Abstact

Sam68 and T-STAR are members of the STAR family of proteins that directly link signal transduction with post-transcriptional gene regulation. Sam68 controls the alternative splicing of many oncogenic proteins. T-STAR is a tissue-specific paralogue that regulates the alternative splicing of neuronal pre-mRNAs. STAR proteins differ from most splicing factors, in that they contain a single RNA-binding domain. Their specificity of RNA recognition is thought to arise from their property to homodimerize, but how dimerization influences their function remains unknown. Here, we establish at atomic resolution how T-STAR and Sam68 bind to RNA, revealing an unexpected mode of dimerization different from other members of the STAR family. We further demonstrate that this unique dimerization interface is crucial for their biological activity in splicing regulation, and suggest that the increased RNA affinity through dimer formation is a crucial parameter enabling these proteins to select their functional targets within the transcriptome.

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