5EKJ image
Entry Detail
PDB ID:
5EKJ
Title:
Human Carbonic Anhydrase II complexed with a two-faced guest
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2015-11-03
Release Date:
2016-01-06
Method Details:
Experimental Method:
Resolution:
1.13 Å
R-Value Free:
0.15
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Carbonic anhydrase 2
Mutations:S2A
Chain IDs:A
Chain Length:260
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Programming A Molecular Relay for Ultrasensitive Biodetection through (129) Xe NMR.
Angew.Chem.Int.Ed.Engl. 55 1733 1736 (2016)
PMID: 26692420 DOI: 10.1002/anie.201508990

Abstact

A supramolecular strategy for detecting specific proteins in complex media by using hyperpolarized (129) Xe NMR is reported. A cucurbit[6]uril (CB[6])-based molecular relay was programmed for three sequential equilibrium conditions by designing a two-faced guest (TFG) that initially binds CB[6] and blocks the CB[6]-Xe interaction. The protein analyte recruits the TFG and frees CB[6] for Xe binding. TFGs containing CB[6]- and carbonic anhydrase II (CAII)-binding domains were synthesized in one or two steps. X-ray crystallography confirmed TFG binding to Zn(2+) in the deep CAII active-site cleft, which precludes simultaneous CB[6] binding. The molecular relay was reprogrammed to detect avidin by using a different TFG. Finally, Xe binding by CB[6] was detected in buffer and in E. coli cultures expressing CAII through ultrasensitive (129) Xe NMR spectroscopy.

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Primary Citation of related structures