5EH6 image
Deposition Date 2015-10-28
Release Date 2015-12-23
Last Version Date 2023-09-27
Entry Detail
PDB ID:
5EH6
Title:
Crystal Structure of the Glycophorin A Transmembrane Monomer in Lipidic Cubic Phase
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.92 Å
R-Value Free:
0.23
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
H 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycophorin-A
Gene (Uniprot):GYPA
Mutagens:M100I
Chain IDs:A
Chain Length:30
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal Structure of the Glycophorin A Transmembrane Dimer in Lipidic Cubic Phase.
J.Am.Chem.Soc. 137 15676 15679 (2015)
PMID: 26642914 DOI: 10.1021/jacs.5b11354

Abstact

The mechanisms of assembly and function for many important type I/II (single-pass) transmembrane (TM) receptors are proposed to involve the formation and/or alteration of specific interfaces among their membrane-embedded α-helical TM domains. The application of lipidic cubic phase (LCP) bilayer media for crystallization of single-α-helical TM complexes has the potential to provide valuable structural and mechanistic insights into many such systems. However, the fidelity of the interfaces observed in crowded crystalline arrays has been difficult to establish from the very limited number of such structures determined using X-ray diffraction data. Here we examine this issue using the glycophorin A (GpA) model system, whose homodimeric TM helix interface has been characterized by solution and solid-state NMR and biochemical techniques but never crystallographically. We report that a GpA-TM peptide readily crystallized in a monoolein cubic phase bilayer, yielding a dimeric α-helical structure that is in excellent agreement with previously reported NMR measurements made in several different types of host media. These results provide compelling support for the wider application of LCP techniques to enable X-ray crystallographic analysis of single-pass TM interactions.

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Primary Citation of related structures