5EF5 image
Deposition Date 2015-10-23
Release Date 2015-12-30
Last Version Date 2024-05-08
Entry Detail
PDB ID:
5EF5
Title:
Crystal structure of Chaetomium thermophilum Raptor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.30 Å
R-Value Free:
0.39
R-Value Work:
0.37
R-Value Observed:
0.37
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Raptor from Chaetomium thermophilum
Chain IDs:A (auth: E), B (auth: A)
Chain Length:1029
Number of Molecules:2
Biological Source:Chaetomium thermophilum
Ligand Molecules
Primary Citation
Architecture of human mTOR complex 1.
Science 351 48 52 (2016)
PMID: 26678875 DOI: 10.1126/science.aaa3870

Abstact

Target of rapamycin (TOR), a conserved protein kinase and central controller of cell growth, functions in two structurally and functionally distinct complexes: TORC1 and TORC2. Dysregulation of mammalian TOR (mTOR) signaling is implicated in pathologies that include diabetes, cancer, and neurodegeneration. We resolved the architecture of human mTORC1 (mTOR with subunits Raptor and mLST8) bound to FK506 binding protein (FKBP)-rapamycin, by combining cryo-electron microscopy at 5.9 angstrom resolution with crystallographic studies of Chaetomium thermophilum Raptor at 4.3 angstrom resolution. The structure explains how FKBP-rapamycin and architectural elements of mTORC1 limit access to the recessed active site. Consistent with a role in substrate recognition and delivery, the conserved amino-terminal domain of Raptor is juxtaposed to the kinase active site.

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Primary Citation of related structures