5EDJ image
Entry Detail
PDB ID:
5EDJ
Title:
Crystal structure of the Neisseria meningitidis iron-regulated outer membrane lipoprotein FrpD
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2015-10-21
Release Date:
2017-02-01
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:FrpC operon protein
Chain IDs:A
Chain Length:231
Number of Molecules:1
Biological Source:Neisseria meningitidis MC58
Primary Citation
Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.
Sci Rep 7 40408 40408 (2017)
PMID: 28084396 DOI: 10.1038/srep40408

Abstact

The iron-regulated protein FrpD from Neisseria meningitidis is an outer membrane lipoprotein that interacts with very high affinity (Kd ~ 0.2 nM) with the N-terminal domain of FrpC, a Type I-secreted protein from the Repeat in ToXin (RTX) protein family. In the presence of Ca2+, FrpC undergoes Ca2+ -dependent protein trans-splicing that includes an autocatalytic cleavage of the Asp414-Pro415 peptide bond and formation of an Asp414-Lys isopeptide bond. Here, we report the high-resolution structure of FrpD and describe the structure-function relationships underlying the interaction between FrpD and FrpC1-414. We identified FrpD residues involved in FrpC1-414 binding, which enabled localization of FrpD within the low-resolution SAXS model of the FrpD-FrpC1-414 complex. Moreover, the trans-splicing activity of FrpC resulted in covalent linkage of the FrpC1-414 fragment to plasma membrane proteins of epithelial cells in vitro, suggesting that formation of the FrpD-FrpC1-414 complex may be involved in the interaction of meningococci with the host cell surface.

Legend

Protein

Chemical

Disease

Primary Citation of related structures