5E9T image
Deposition Date 2015-10-15
Release Date 2016-03-02
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5E9T
Title:
Crystal structure of GtfA/B complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.92 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycosyltransferase Gtf1
Gene (Uniprot):gtfA
Mutations:S124F
Chain IDs:A, C
Chain Length:503
Number of Molecules:2
Biological Source:Streptococcus gordonii
Polymer Type:polypeptide(L)
Molecule:Glycosyltransferase-stabilizing protein Gtf2
Gene (Uniprot):gtfB
Chain IDs:B, D
Chain Length:447
Number of Molecules:2
Biological Source:Streptococcus gordonii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Mechanism of a cytosolic O-glycosyltransferase essential for the synthesis of a bacterial adhesion protein.
Proc.Natl.Acad.Sci.USA 113 E1190 E1199 (2016)
PMID: 26884191 DOI: 10.1073/pnas.1600494113

Abstact

O-glycosylation of Ser and Thr residues is an important process in all organisms, which is only poorly understood. Such modification is required for the export and function of adhesin proteins that mediate the attachment of pathogenic Gram-positive bacteria to host cells. Here, we have analyzed the mechanism by which the cytosolic O-glycosyltransferase GtfA/B of Streptococcus gordonii modifies the Ser/Thr-rich repeats of adhesin. The enzyme is a tetramer containing two molecules each of GtfA and GtfB. The two subunits have the same fold, but only GtfA contains an active site, whereas GtfB provides the primary binding site for adhesin. During a first phase of glycosylation, the conformation of GtfB is restrained by GtfA to bind substrate with unmodified Ser/Thr residues. In a slow second phase, GtfB recognizes residues that are already modified with N-acetylglucosamine, likely by converting into a relaxed conformation in which one interface with GtfA is broken. These results explain how the glycosyltransferase modifies a progressively changing substrate molecule.

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Primary Citation of related structures