5DUY image
Entry Detail
PDB ID:
5DUY
Title:
Structure of lectin from the sea mussel Crenomytilus grayanus
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-09-21
Release Date:
2015-11-11
Method Details:
Experimental Method:
Resolution:
2.12 Å
R-Value Free:
0.18
R-Value Work:
0.13
R-Value Observed:
0.14
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GalNAc/Gal-specific lectin
Chain IDs:A, B, C, D, E, F
Chain Length:181
Number of Molecules:6
Biological Source:Crenomytilus grayanus
Ligand Molecules
Primary Citation
Structure of a lectin from the sea mussel Crenomytilus grayanus (CGL).
Acta Crystallogr.,Sect.F 71 1429 1436 (2015)
PMID: 26527272 DOI: 10.1107/S2053230X15019858

Abstact

CGL is a 150 amino-acid residue lectin that was originally isolated from the sea mussel Crenomytilus grayanus. It is specific for binding GalNAc/Gal-containing carbohydrate moieties and in general does not share sequence homology with other known galectins or lectins. Since CGL displays antibacterial, antifungal and antiviral activities, and interacts with high affinity with mucin-type receptors, which are abundant on some cancer cells, knowledge of its structure is of significant interest. Conditions have been established for the expression, purification and crystallization of a recombinant variant of CGL. The crystal structure of recombinant CGL was determined and refined at a resolution of 2.12 Å. The amino-acid sequence of CGL contains three homologous regions (73% similarity) and the folded protein has a β-trefoil topology. Structural comparison of CGL with the closely related lectin MytiLec allowed description of the glycan-binding pockets.

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Primary Citation of related structures