5DTU image
Deposition Date 2015-09-18
Release Date 2016-05-04
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5DTU
Keywords:
Title:
Crystal structure of the RNA-helicase Prp28 from Chaetomium thermophilum bound to ADP
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.28
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Prp28
Gene (Uniprot):CTHT_0054430
Chain IDs:A
Chain Length:475
Number of Molecules:1
Biological Source:Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Primary Citation
Structural analysis of the spliceosomal RNA helicase Prp28 from the thermophilic eukaryote Chaetomium thermophilum.
Acta Crystallogr.,Sect.F 72 409 416 (2016)
PMID: 27139834 DOI: 10.1107/S2053230X16006038

Abstact

Prp28 (pre-mRNA-splicing ATP-dependent RNA helicase 28) is a spliceosomal DEAD-box helicase which is involved in two steps of spliceosome assembly. It is required for the formation of commitment complex 2 in an ATP-independent manner as well as for the formation of the pre-catalytic spliceosome, which in contrast is ATP-dependent. During the latter step, Prp28 is crucial for the integration of the U4/U6·U5 tri-snRNP since it displaces the U1 snRNP and allows the U6 snRNP to base-pair with the 5'-splice site. Here, the crystal structure of Prp28 from the thermophilic fungus Chaetomium thermophilum is reported at 3.2 Å resolution and is compared with the available structures of homologues.

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Primary Citation of related structures
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