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Entry Detail
PDB ID:
5DO6
Keywords:
Title:
Crystal structure of Dendroaspis polylepis venom mambalgin-1 T23A mutant
Biological Source:
PDB Version:
Deposition Date:
2015-09-10
Release Date:
2015-12-30
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Mambalgin-1
Mutations:T23A
Chain IDs:A, B
Chain Length:57
Number of Molecules:2
Biological Source:Dendroaspis polylepis polylepis
Primary Citation
Mambalgin-1 Pain-relieving Peptide, Stepwise Solid-phase Synthesis, Crystal Structure, and Functional Domain for Acid-sensing Ion Channel 1a Inhibition.
J.Biol.Chem. 291 2616 2629 (2016)
PMID: 26680001 DOI: 10.1074/jbc.M115.702373

Abstact

Mambalgins are peptides isolated from mamba venom that specifically inhibit a set of acid-sensing ion channels (ASICs) to relieve pain. We show here the first full stepwise solid phase peptide synthesis of mambalgin-1 and confirm the biological activity of the synthetic toxin both in vitro and in vivo. We also report the determination of its three-dimensional crystal structure showing differences with previously described NMR structures. Finally, the functional domain by which the toxin inhibits ASIC1a channels was identified in its loop II and more precisely in the face containing Phe-27, Leu-32, and Leu-34 residues. Moreover, proximity between Leu-32 in mambalgin-1 and Phe-350 in rASIC1a was proposed from double mutant cycle analysis. These data provide information on the structure and on the pharmacophore for ASIC channel inhibition by mambalgins that could have therapeutic value against pain and probably other neurological disorders.

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