5DMR image
Deposition Date 2015-09-09
Release Date 2016-07-06
Last Version Date 2023-11-08
Entry Detail
PDB ID:
5DMR
Title:
Crystal Structure of C-terminal domain of mouse eRF1 in complex with RNase H domain of RT of Moloney Murine Leukemia Virus
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.28
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Reverse transcriptase/ribonuclease H p80
Gene (Uniprot):gag-pol
Chain IDs:A
Chain Length:172
Number of Molecules:1
Biological Source:Moloney murine leukemia virus (isolate Shinnick)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Eukaryotic peptide chain release factor subunit 1
Gene (Uniprot):Etf1
Chain IDs:B
Chain Length:162
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun 7 12070 12070 (2016)
PMID: 27329342 DOI: 10.1038/ncomms12070

Abstact

Retroviral reverse transcriptase (RT) of Moloney murine leukemia virus (MoMLV) is expressed in the form of a large Gag-Pol precursor protein by suppression of translational termination in which the maximal efficiency of stop codon read-through depends on the interaction between MoMLV RT and peptidyl release factor 1 (eRF1). Here, we report the crystal structure of MoMLV RT in complex with eRF1. The MoMLV RT interacts with the C-terminal domain of eRF1 via its RNase H domain to sterically occlude the binding of peptidyl release factor 3 (eRF3) to eRF1. Promotion of read-through by MoMLV RNase H prevents nonsense-mediated mRNA decay (NMD) of mRNAs. Comparison of our structure with that of HIV RT explains why HIV RT cannot interact with eRF1. Our results provide a mechanistic view of how MoMLV manipulates the host translation termination machinery for the synthesis of its own proteins.

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Primary Citation of related structures
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