5DI3 image
Deposition Date 2015-08-31
Release Date 2015-11-18
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5DI3
Keywords:
Title:
Crystal structure of Arl13B in complex with Arl3 of Chlamydomonas reinhardtii
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ADP-ribosylation factor-like protein 3
Gene (Uniprot):ARL3
Chain IDs:B (auth: A)
Chain Length:185
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:ADP-ribosylation factor-like protein 13B
Gene (Uniprot):ARL13
Chain IDs:A (auth: B)
Chain Length:263
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Primary Citation
A G-protein activation cascade from Arl13B to Arl3 and implications for ciliary targeting of lipidated proteins.
Elife 4 ? ? (2015)
PMID: 26551564 DOI: 10.7554/eLife.11859

Abstact

Small G-proteins of the ADP-ribosylation-factor-like (Arl) subfamily have been shown to be crucial to ciliogenesis and cilia maintenance. Active Arl3 is involved in targeting and releasing lipidated cargo proteins from their carriers PDE6δ and UNC119a/b to the cilium. However, the guanine nucleotide exchange factor (GEF) which activates Arl3 is unknown. Here we show that the ciliary G-protein Arl13B mutated in Joubert syndrome is the GEF for Arl3, and its function is conserved in evolution. The GEF activity of Arl13B is mediated by the G-domain plus an additional C-terminal helix. The switch regions of Arl13B are involved in the interaction with Arl3. Overexpression of Arl13B in mammalian cell lines leads to an increased Arl3·GTP level, whereas Arl13B Joubert-Syndrome patient mutations impair GEF activity and thus Arl3 activation. We anticipate that through Arl13B's exclusive ciliary localization, Arl3 activation is spatially restricted and thereby an Arl3·GTP compartment generated where ciliary cargo is specifically released.

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