5DCY image
Deposition Date 2015-08-24
Release Date 2015-10-28
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5DCY
Keywords:
Title:
Iridoid synthase G150A mutant from Catharanthus roseus - binary complex with NADP+
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Iridoid synthase
Chain IDs:A, B
Chain Length:368
Number of Molecules:2
Biological Source:Catharanthus roseus
Primary Citation
Structural determinants of reductive terpene cyclization in iridoid biosynthesis.
Nat.Chem.Biol. 12 6 8 (2016)
PMID: 26551396 DOI: 10.1038/nchembio.1955

Abstact

The carbon skeleton of ecologically and pharmacologically important iridoid monoterpenes is formed in a reductive cyclization reaction unrelated to canonical terpene cyclization. Here we report the crystal structure of the recently discovered iridoid cyclase (from Catharanthus roseus) bound to a mechanism-inspired inhibitor that illuminates substrate binding and catalytic function of the enzyme. Key features that distinguish iridoid synthase from its close homolog progesterone 5β-reductase are highlighted.

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Primary Citation of related structures