5DAR image
Deposition Date 2015-08-20
Release Date 2016-09-14
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5DAR
Keywords:
RIBOSOMAL PROTEIN
Title:
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
Biological Source:
Source Organism:
Methanocaldococcus jannaschii (Taxon ID: 2190)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.90 Å
R-Value Free:
0.29
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 1 21 1
5DAR validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:74 nt fragment of 23S rRNA
Chain IDs:A, D
Chain Length:74
Number of Molecules:2
Biological Source:Methanocaldococcus jannaschii
Protein Blast
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L10
Gene (Uniprot):rpl10
Chain IDs:B, E
Chain Length:213
Number of Molecules:2
Biological Source:Methanocaldococcus jannaschii
UniProt ID:P54049 Pfam ID:PF00466, PF17777
Protein Blast
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L11
Gene (Uniprot):rpl11
Chain IDs:C, F
Chain Length:161
Number of Molecules:2
Biological Source:Methanocaldococcus jannaschii
UniProt ID:P54030 Pfam ID:PF03946, PF00298
Ligand Molecules
CL
K
MG
Primary Citation
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
To Be Published ? ? ? (?)
Primary Citation of related structures
5D8H
5D6G
5COL