5DAP image
Deposition Date 2015-08-20
Release Date 2015-11-25
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5DAP
Keywords:
Title:
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phytanoyl-CoA dioxygenase family protein (AFU_orthologue AFUA_8G00230)
Gene (Uniprot):asqJ
Chain IDs:A
Chain Length:308
Number of Molecules:1
Biological Source:Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Primary Citation
Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Angew.Chem.Int.Ed.Engl. 55 422 426 (2016)
PMID: 26553478 DOI: 10.1002/anie.201507835

Abstact

Multienzymatic cascades are responsible for the biosynthesis of natural products and represent a source of inspiration for synthetic chemists. The Fe(II)/α-ketoglutarate-dependent dioxygenase AsqJ from Aspergillus nidulans is outstanding because it stereoselectively catalyzes both a ferryl-induced desaturation reaction and epoxidation on a benzodiazepinedione. Interestingly, the enzymatically formed spiro epoxide spring-loads the 6,7-bicyclic skeleton for non-enzymatic rearrangement into the 6,6-bicyclic scaffold of the quinolone alkaloid 4'-methoxyviridicatin. Herein, we report different crystal structures of the protein in the absence and presence of synthesized substrates, surrogates, and intermediates that mimic the various stages of the reaction cycle of this exceptional dioxygenase.

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Primary Citation of related structures