5DA5 image
Entry Detail
PDB ID:
5DA5
Keywords:
Title:
Crystal structure of Rhodospirillum rubrum Rru_A0973
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-08-19
Release Date:
2016-08-10
Method Details:
Experimental Method:
Resolution:
2.06 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Rru_A0973
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d)
Chain Length:116
Number of Molecules:30
Biological Source:Rhodospirillum rubrum
Primary Citation
Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife 5 ? ? (2016)
PMID: 27529188 DOI: 10.7554/eLife.18972

Abstact

Ferritins are ubiquitous proteins that oxidise and store iron within a protein shell to protect cells from oxidative damage. We have characterized the structure and function of a new member of the ferritin superfamily that is sequestered within an encapsulin capsid. We show that this encapsulated ferritin (EncFtn) has two main alpha helices, which assemble in a metal dependent manner to form a ferroxidase center at a dimer interface. EncFtn adopts an open decameric structure that is topologically distinct from other ferritins. While EncFtn acts as a ferroxidase, it cannot mineralize iron. Conversely, the encapsulin shell associates with iron, but is not enzymatically active, and we demonstrate that EncFtn must be housed within the encapsulin for iron storage. This encapsulin nanocompartment is widely distributed in bacteria and archaea and represents a distinct class of iron storage system, where the oxidation and mineralization of iron are distributed between two proteins.

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