5DA0 image
Entry Detail
PDB ID:
5DA0
Title:
Structure of the the SLC26 transporter SLC26Dg in complex with a nanobody
Biological Source:
PDB Version:
Deposition Date:
2015-08-19
Release Date:
2015-09-09
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.26
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Sulphate transporter
Chain IDs:A
Chain Length:505
Number of Molecules:1
Biological Source:Deinococcus geothermalis (strain DSM 11300)
Polymer Type:polypeptide(L)
Description:Nanobody
Chain IDs:B
Chain Length:124
Number of Molecules:1
Biological Source:Lama glama
Ligand Molecules
Primary Citation
Structure of a prokaryotic fumarate transporter reveals the architecture of the SLC26 family.
Nat.Struct.Mol.Biol. 22 803 808 (2015)
PMID: 26367249 DOI: 10.1038/nsmb.3091

Abstact

The SLC26 family of membrane proteins combines a variety of functions within a conserved molecular scaffold. Its members, besides coupled anion transporters and channels, include the motor protein Prestin, which confers electromotility to cochlear outer hair cells. To gain insight into the architecture of this protein family, we characterized the structure and function of SLC26Dg, a facilitator of proton-coupled fumarate symport, from the bacterium Deinococcus geothermalis. Its modular structure combines a transmembrane unit and a cytoplasmic STAS domain. The membrane-inserted domain consists of two intertwined inverted repeats of seven transmembrane segments each and resembles the fold of the unrelated transporter UraA. It shows an inward-facing, ligand-free conformation with a potential substrate-binding site at the interface between two helix termini at the center of the membrane. This structure defines the common framework for the diverse functional behavior of the SLC26 family.

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Primary Citation of related structures