5D5V image
Deposition Date 2015-08-11
Release Date 2015-12-30
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5D5V
Title:
Crystal structure of human Hsf1 with Satellite III repeat DNA
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Molecule:DNA
Chain IDs:C (auth: A)
Chain Length:12
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Heat shock factor protein 1
Gene (Uniprot):HSF1
Chain IDs:A (auth: B), B (auth: D)
Chain Length:131
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA
Chain IDs:D (auth: C)
Chain Length:12
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of human heat-shock transcription factor 1 in complex with DNA.
Nat.Struct.Mol.Biol. 23 140 146 (2016)
PMID: 26727489 DOI: 10.1038/nsmb.3149

Abstact

Heat-shock transcription factor 1 (HSF1) has a central role in mediating the protective response to protein conformational stresses in eukaryotes. HSF1 consists of an N-terminal DNA-binding domain (DBD), a coiled-coil oligomerization domain, a regulatory domain and a transactivation domain. Upon stress, HSF1 trimerizes via its coiled-coil domain and binds to the promoters of heat shock protein-encoding genes. Here, we present cocrystal structures of the human HSF1 DBD in complex with cognate DNA. A comparative analysis of the HSF1 paralog Skn7 from Chaetomium thermophilum showed that single amino acid changes in the DBD can switch DNA binding specificity, thus revealing the structural basis for the interaction of HSF1 with cognate DNA. We used a crystal structure of the coiled-coil domain of C. thermophilum Skn7 to develop a model of the active human HSF1 trimer in which HSF1 embraces the heat-shock-element DNA.

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Primary Citation of related structures
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