5D55 image
Deposition Date 2015-08-10
Release Date 2016-08-10
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5D55
Keywords:
Title:
Crystal structure of the E. coli Hda pilus minor tip subunit, HdaB
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 43 21 2
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HdaB,HdaA (Adhesin), HUS-associated diffuse adherence
Gene (Uniprot):hdaB, hdaA
Chain IDs:A, B
Chain Length:157
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Crystal structure and analysis of HdaB: The enteroaggregative Escherichia coli AAF/IV pilus tip protein.
Protein Sci. 25 1898 1905 (2016)
PMID: 27400770 DOI: 10.1002/pro.2982

Abstact

Enteroaggregative Escherichia coli is the primary cause of pediatric diarrhea in developing countries. They utilize aggregative adherence fimbriae (AAFs) to promote initial adherence to the host intestinal mucosa, promote the formation of biofilms, and mediate host invasion. Five AAFs have been identified to date and AAF/IV is amongst the most prevalent found in clinical isolates. Here we present the X-ray crystal structure of the AAF/IV tip protein HdaB at 2.0 Å resolution. It shares high structural homology with members of the Afa/Dr superfamily of fimbriae, which are involved in host invasion. We highlight surface exposed residues that share sequence homology and propose that these may function in invasion and also non-conserved regions that could mediate HdaB specific adhesive functions.

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Primary Citation of related structures