5D4K image
Deposition Date 2015-08-07
Release Date 2016-03-16
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5D4K
Keywords:
Title:
Crystal structure of the human polymeric Ig receptor (pIgR) ectodomain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Polymeric immunoglobulin receptor
Gene (Uniprot):PIGR
Chain IDs:A, B
Chain Length:557
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
The structure and dynamics of secretory component and its interactions with polymeric immunoglobulins.
Elife 5 ? ? (2016)
PMID: 26943617 DOI: 10.7554/eLife.10640

Abstact

As a first-line vertebrate immune defense, the polymeric immunoglobulin receptor (pIgR) transports polymeric IgA and IgM across epithelia to mucosal secretions, where the cleaved ectodomain (secretory component; SC) becomes a component of secretory antibodies, or when unliganded, binds and excludes bacteria. Here we report the 2.6Å crystal structure of unliganded human SC (hSC) and comparisons with a 1.7Å structure of teleost fish SC (tSC), an early pIgR ancestor. The hSC structure comprises five immunoglobulin-like domains (D1-D5) arranged as a triangle, with an interface between ligand-binding domains D1 and D5. Electron paramagnetic resonance measurements confirmed the D1-D5 interface in solution and revealed that it breaks upon ligand binding. Together with binding studies of mutant and chimeric SCs, which revealed domain contributions to secretory antibody formation, these results provide detailed models for SC structure, address pIgR evolution, and demonstrate that SC uses multiple conformations to protect mammals from pathogens.

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Primary Citation of related structures