5D1I image
Deposition Date 2015-08-04
Release Date 2015-09-09
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5D1I
Title:
Structure of Cyclic nucleotide-binding-like protein from Brucella abortus bv. 1 str. 9-941
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cyclic nucleotide-binding protein
Gene (Uniprot):BruAb1_1980
Chain IDs:A, B
Chain Length:131
Number of Molecules:2
Biological Source:Brucella abortus biovar 1
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Crystal structure of cyclic nucleotide-binding-like protein from Brucella abortus
Biochem.Biophys.Res.Commun. 468 647 652 (2015)
PMID: 26549229 DOI: 10.1016/j.bbrc.2015.11.005

Abstact

The cyclic nucleotide-binding (CNB)-like protein (CNB-L) from Brucella abortus shares sequence homology with CNB domain-containing proteins. We determined the crystal structure of CNB-L at 2.0 Å resolution in the absence of its C-terminal helix and nucleotide. The 3D structure of CNB-L is in a two-fold symmetric form. Each protomer shows high structure similarity to that of cGMP-binding domain-containing proteins, and likely mimics their nucleotide-free conformation. A key residue, Glu17, mediates the dimerization and prevents binding of cNMP to the canonical ligand-pocket. The structurally observed dimer of CNB-L is stable in solution, and thus is likely to be biologically relevant.

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Primary Citation of related structures