5CZB image
Entry Detail
PDB ID:
5CZB
Keywords:
Title:
HCV NS5B IN COMPLEX WITH LIGAND IDX17119-5
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2015-07-31
Release Date:
2016-06-15
Method Details:
Experimental Method:
Resolution:
1.96 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NS5B
Chain IDs:A, B
Chain Length:563
Number of Molecules:2
Biological Source:Hepatitis C virus subtype 1b
Primary Citation
Synthesis of potent and broad genotypically active NS5B HCV non-nucleoside inhibitors binding to the thumb domain allosteric site 2 of the viral polymerase.
Bioorg.Med.Chem.Lett. 26 4536 4541 (2016)
PMID: 27520942 DOI: 10.1016/j.bmcl.2016.01.042

Abstact

The hepatitis C virus (HCV) NS5B RNA-dependent RNA polymerase (RdRp) plays a central role in virus replication. NS5B has no functional equivalent in mammalian cells and, as a consequence, is an attractive target for selective inhibition. This Letter describes the discovery of a new family of HCV NS5B non-nucleoside inhibitors, based on the bioisosterism between amide and phosphonamidate functions. As part of this program, SAR in this new series led to the identification of IDX17119, a potent non-nucleoside inhibitor, active on the genotypes 1b, 2a, 3a and 4a. The structure and binding domain of IDX17119 were confirmed by X-ray co-crystallization study.

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