ISDA: 5CYS

Deposition Date 2015-07-30

Release Date 2015-09-16

Last Version Date 2024-03-06

Entry Detail

PDB ID:

5CYS

Keywords:

hydrolase/dna

Title:

Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.45 Å

R-Value Free:

0.22

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

C 1 2 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:G/T mismatch-specific thymine DNA glycosylase
Gene (Uniprot):TDG
Chain IDs:A
Chain Length:204
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q13569 Pfam ID:PF03167 EC:3.2.2.29

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (28-MER)
Chain IDs:B (auth: C)
Chain Length:28
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (28-MER)
Chain IDs:C (auth: D)
Chain Length:28
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

ACY

Primary Citation

Characterizing the enzyme-product complexes of thymine DNA glycosylase using crystallography and NMR

Malik, S.S, Varney, K.M, Pozharski, E, Drohat, A.C.Show

Nucleic Acids Res. ? ? ? (2015)

Primary Citation of related structures