5CVY image
Entry Detail
PDB ID:
5CVY
Keywords:
Title:
The Structure of Bacillus pumilus GH48 in complex with cellobiose and cellohexaose
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2015-07-27
Release Date:
2016-08-10
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glycoside hydrolase
Chain IDs:A
Chain Length:709
Number of Molecules:1
Biological Source:Bacillus pumilus (strain SAFR-032)
Peptide-like Molecules
PRD_900005
PRD_900020
Primary Citation
Natural diversity of glycoside hydrolase family 48 exoglucanases: insights from structure.
Biotechnol Biofuels 10 274 274 (2017)
PMID: 29213319 DOI: 10.1186/s13068-017-0951-5

Abstact

Glycoside hydrolase (GH) family 48 is an understudied and increasingly important exoglucanase family found in the majority of bacterial cellulase systems. Moreover, many thermophilic enzyme systems contain GH48 enzymes. Deletion of GH48 enzymes in these microorganisms results in drastic reduction in biomass deconstruction. Surprisingly, given their importance for these microorganisms, GH48s have intrinsically low cellulolytic activity but even in low ratios synergize greatly with GH9 endoglucanases. In this study, we explore the structural and enzymatic diversity of these enzymes across a wide range of temperature optima. We have crystallized one new GH48 module from Bacillus pumilus in a complex with cellobiose and cellohexaose (BpumGH48). We compare this structure to other known GH48 enzymes in an attempt to understand GH48 structure/function relationships and draw general rules correlating amino acid sequences and secondary structures to thermostability in this GH family.

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