ISDA

Deposition Date 2015-07-23

Release Date 2015-10-14

Last Version Date 2024-03-06

Entry Detail

PDB ID:

5CTE

Keywords:

TRANSFERASE/TRANSFERASE INHIBITOR

Title:

Humanized yeast ACC carboxyltransferase domain bound to 2,2-dimethylpropyl (1S)-1-methyl-8-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,8-diazaspiro[4.5]decane-2-carboxylate

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.34 Å

R-Value Free:

0.21

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Acetyl-CoA carboxylase
Gene (Uniprot):ACC1
Mutations:E1919Q,P1920A,H1925F,P1760S,I1762L,M1765V,Q2028E,M2030T,G2032E
Chain IDs:A (auth: B), B (auth: C)
Chain Length:769
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q00955 Pfam ID:PF01039 EC:6.3.4.14

Ligand Molecules

57L

SO4

Primary Citation

Discovery of spirocyclic-diamine inhibitors of mammalian acetyl CoA-carboxylase.

Kung, D.W, Griffith, D.A, Esler, W.P, Vajdos, F.F, Mathiowetz, A.M, Doran, S.D, Amor, P.A, Bagley, S.W, Banks, T, Cabral, S, Ford, K, Garcia-Irizarry, C.N, Landis, M.S, Loomis, K, McPherson, K, Niosi, M, Rockwell, K.L, Rose, C, Smith, A.C, Southers, J.A, Tapley, S, Tu, M, Valentine, J.J.Show

Bioorg.Med.Chem.Lett. 25 5352 5356 (2015)

PMID: 26411795 DOI: 10.1016/j.bmcl.2015.09.035

Abstact

A novel series of spirocyclic-diamine based, isoform non-selective inhibitors of acetyl-CoA carboxylase (ACC) is described. These spirodiamine derivatives were discovered by design of a library to mimic the structural rigidity and hydrogen-bonding pattern observed in the co-crystal structure of spirochromanone inhibitor I. The lead compound 3.5.1 inhibited de novo lipogenesis in rat hepatocytes, with an IC50 of 0.30 μM.

Legend

Protein

Chemical

Disease

Primary Citation of related structures