5CR4 image
Deposition Date 2015-07-22
Release Date 2016-03-30
Last Version Date 2024-01-10
Entry Detail
PDB ID:
5CR4
Keywords:
Title:
Crystal structure of the Sleeping Beauty transposase catalytic domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.40 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Sleeping Beauty transposase, SB100X
Chain IDs:A, B
Chain Length:230
Number of Molecules:2
Biological Source:synthetic construct
Primary Citation
Sleeping Beauty transposase structure allows rational design of hyperactive variants for genetic engineering.
Nat Commun 7 11126 11126 (2016)
PMID: 27025571 DOI: 10.1038/ncomms11126

Abstact

Sleeping Beauty (SB) is a prominent Tc1/mariner superfamily DNA transposon that provides a popular genome engineering tool in a broad range of organisms. It is mobilized by a transposase enzyme that catalyses DNA cleavage and integration at short specific sequences at the transposon ends. To facilitate SB's applications, here we determine the crystal structure of the transposase catalytic domain and use it to model the SB transposase/transposon end/target DNA complex. Together with biochemical and cell-based transposition assays, our structure reveals mechanistic insights into SB transposition and rationalizes previous hyperactive transposase mutations. Moreover, our data enables us to design two additional hyperactive transposase variants. Our work provides a useful resource and proof-of-concept for structure-based engineering of tailored SB transposases.

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