5CQ9 image
Deposition Date 2015-07-21
Release Date 2015-09-09
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5CQ9
Keywords:
Title:
Crystal structure of SopD2, a type III secreted virulence effector from Salmonella enterica
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.30
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Secreted effector protein sopD2
Gene (Uniprot):sopD2
Chain IDs:A, B
Chain Length:319
Number of Molecules:2
Biological Source:Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Polymer Type:polypeptide(L)
Molecule:11-mer peptide
Chain IDs:C, D
Chain Length:11
Number of Molecules:2
Biological Source:Salmonella enterica subsp. enterica serovar Typhimurium
Ligand Molecules
Primary Citation
Salmonella Disrupts Host Endocytic Trafficking by SopD2-Mediated Inhibition of Rab7.
Cell Rep 12 1508 1518 (2015)
PMID: 26299973 DOI: 10.1016/j.celrep.2015.07.063

Abstact

Intracellular bacterial pathogens of a diverse nature share the ability to evade host immunity by impairing trafficking of endocytic cargo to lysosomes for degradation, a process that is poorly understood. Here, we show that the Salmonella enterica type 3 secreted effector SopD2 mediates this process by binding the host regulatory GTPase Rab7 and inhibiting its nucleotide exchange. Consequently, this limits Rab7 interaction with its dynein- and kinesin-binding effectors RILP and FYCO1 and thereby disrupts host-driven regulation of microtubule motors. Our study identifies a bacterial effector capable of directly binding and thereby modulating Rab7 activity and a mechanism of endocytic trafficking disruption that may provide insight into the pathogenesis of other bacteria. Additionally, we provide a powerful tool for the study of Rab7 function, and a potential therapeutic target.

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