ISDA: 5CPD

Deposition Date 2015-07-21

Release Date 2016-08-03

Last Version Date 2024-10-23

Entry Detail

PDB ID:

5CPD

Keywords:

HYDROLASE

Title:

Methionine-alanine complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae

Biological Source:

Source Organism:

Xanthomonas oryzae pv. oryzae KACC10331 (Taxon ID: 291331)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.20 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 61 2 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peptide deformylase
Gene (Uniprot):def
Chain IDs:A
Chain Length:171
Number of Molecules:1
Biological Source:Xanthomonas oryzae pv. oryzae KACC10331

UniProt ID:Q5H3Z2 Pfam ID:PF01327 EC:3.5.1.88

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
CSD	A	CYS	modified residue

Ligand Molecules

ACT

ALA

GOL

MET

Primary Citation

Methionine-alanine complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae

Ngo, H.P.T, Kang, L.W, Ngo, H.P.T, Kang, L.W.Show

To Be Published ? ? ? (?)

Primary Citation of related structures