5CML image
Deposition Date 2015-07-16
Release Date 2016-07-27
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5CML
Keywords:
Title:
Crystal structure of the Esterase domain from Rhodothermus marinus Rmar_1206 protein
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.56 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:OsmC family protein
Gene (Uniprot):Rmar_1206
Chain IDs:A, B
Chain Length:263
Number of Molecules:2
Biological Source:Rhodothermus marinus
Ligand Molecules
Primary Citation
Characterisation of a New Family of Carboxyl Esterases with an OsmC Domain.
Plos One 11 e0166128 e0166128 (2016)
PMID: 27851780 DOI: 10.1371/journal.pone.0166128

Abstact

Proteins in the serine esterase family are widely distributed in bacterial phyla and display activity against a range of biologically produced and chemically synthesized esters. A serine esterase from the psychrophilic bacterium Pseudoalteromonas arctica with a C-terminal OsmC-like domain was recently characterized; here we report on the identification and characterization of further putative esterases with OsmC-like domains constituting a new esterase family that is found in a variety of bacterial species from different environmental niches. All of these proteins contained the Ser-Asp-His motif common to serine esterases and a highly conserved pentapeptide nucleophilic elbow motif. We produced these proteins heterologously in Escherichia coli and demonstrated their activity against a range of esterase substrates. Two of the esterases characterized have activity of over two orders of magnitude higher than other members of the family, and are active over a wide temperature range. We determined the crystal structure of the esterase domain of the protein from Rhodothermus marinus and show that it conforms to the classical α/β hydrolase fold with an extended 'lid' region, which occludes the active site of the protein in the crystal. The expansion of characterized members of the esterase family and demonstration of activity over a wide-range of temperatures could be of use in biotechnological applications such as the pharmaceutical, detergent, bioremediation and dairy industries.

Legend

Protein

Chemical

Disease

Primary Citation of related structures