5CM7 image
Entry Detail
PDB ID:
5CM7
Keywords:
Title:
Structure of thiamine-monophosphate kinase from Acinetobacter baumannii in complex with adenosine diphosphate (ADP) and thiamine diphosphate (TPP)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-07-16
Release Date:
2015-08-26
Method Details:
Experimental Method:
Resolution:
1.55 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Thiamine-monophosphate kinase
Chain IDs:A, B
Chain Length:313
Number of Molecules:2
Biological Source:Acinetobacter baumannii
Primary Citation
Crystal structures of thiamine monophosphate kinase from Acinetobacter baumannii in complex with substrates and products.
Sci Rep 9 4392 4392 (2019)
PMID: 30867460 DOI: 10.1038/s41598-019-40558-x

Abstact

Thiamine monophosphate kinase (ThiL) catalyzes the last step of thiamine pyrophosphate (TPP) synthesis, the ATP-dependent phosphorylation of thiamine monophosphate (TMP) to thiamine pyrophosphate. We solved the structure of ThiL from the human pathogen A. baumanii in complex with a pair of substrates TMP and a non-hydrolyzable adenosine triphosphate analog, and in complex with a pair of products TPP and adenosine diphosphate. High resolution of the data and anomalous diffraction allows for a detailed description of the binding mode of substrates and products, and their metal environment. The structures further support a previously proposed in-line attack reaction mechanism and show a distinct variability of metal content of the active site.

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